WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19C7.8e.1 Sequence Name  F19C7.8e.1
Length (nt)  1643   Chromosome Location  IV: 4610575-4638095
Chromosome . Primary Identifier  IV Chromosome Location . Start  4610575
Chromosome Location . End  4638095 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19C7.8e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017597 F19C7.8 F19C7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19C7.8e F19C7.8e 1317   IV: 4610901-4611005

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19C7.8e.1 4610575 4638095 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119764   431   IV: 4610575-4611005 Caenorhabditis elegans
Exon119773   124   IV: 4611991-4612114 Caenorhabditis elegans
Exon119778   133   IV: 4612159-4612291 Caenorhabditis elegans
Exon119783   126   IV: 4612337-4612462 Caenorhabditis elegans
Exon119788   114   IV: 4613150-4613263 Caenorhabditis elegans
Exon119792   76   IV: 4617230-4617305 Caenorhabditis elegans
Exon119796   128   IV: 4617388-4617515 Caenorhabditis elegans
Exon119799   46   IV: 4623629-4623674 Caenorhabditis elegans
Exon119802   161   IV: 4626327-4626487 Caenorhabditis elegans
Exon119813   304   IV: 4637792-4638095 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19C7.8e.1 4610575 4638095 -1

1 Sequence

Length
1643

1 Sequence Ontology Term

Identifier Name Description
transcript