WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29B9.8.1 Sequence Name  F29B9.8.1
Length (nt)  1397   Chromosome Location  IV: 4647685-4649746
Chromosome . Primary Identifier  IV Chromosome Location . Start  4647685
Chromosome Location . End  4649746 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29B9.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017923 F29B9.8 F29B9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29B9.8 F29B9.8 1146   IV: 4647686-4647836

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29B9.8.1 4647685 4649746 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119814   152   IV: 4647685-4647836 Caenorhabditis elegans
Exon119815   214   IV: 4648023-4648236 Caenorhabditis elegans
Exon119816   66   IV: 4648293-4648358 Caenorhabditis elegans
Exon119817   60   IV: 4648413-4648472 Caenorhabditis elegans
Exon119818   141   IV: 4648521-4648661 Caenorhabditis elegans
Exon119819   163   IV: 4648890-4649052 Caenorhabditis elegans
Exon119820   139   IV: 4649101-4649239 Caenorhabditis elegans
Exon119821   462   IV: 4649285-4649746 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29B9.8.1 4647685 4649746 1

1 Sequence

Length
1397

1 Sequence Ontology Term

Identifier Name Description
transcript