WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29B9.2a.1 Sequence Name  F29B9.2a.1
Length (nt)  3022   Chromosome Location  IV: 4660991-4665212
Chromosome . Primary Identifier  IV Chromosome Location . Start  4660991
Chromosome Location . End  4665212 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29B9.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017920 jmjd-1.2 F29B9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29B9.2a F29B9.2a 2733   IV: 4661009-4661191

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29B9.2a.1 4660991 4665212 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119811   201   IV: 4660991-4661191 Caenorhabditis elegans
Exon119814   72   IV: 4661239-4661310 Caenorhabditis elegans
Exon119817   39   IV: 4661357-4661395 Caenorhabditis elegans
Exon119819   189   IV: 4661453-4661641 Caenorhabditis elegans
Exon119821   403   IV: 4661806-4662208 Caenorhabditis elegans
Exon119824   127   IV: 4662263-4662389 Caenorhabditis elegans
Exon119827   321   IV: 4662748-4663068 Caenorhabditis elegans
Exon119830   232   IV: 4663121-4663352 Caenorhabditis elegans
Exon119833   373   IV: 4663671-4664043 Caenorhabditis elegans
Exon119836   738   IV: 4664098-4664835 Caenorhabditis elegans
Exon119841   327   IV: 4664886-4665212 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29B9.2a.1 4660991 4665212 1

1 Sequence

Length
3022

1 Sequence Ontology Term

Identifier Name Description
transcript