WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29B9.2b.1 Sequence Name  F29B9.2b.1
Length (nt)  2979   Chromosome Location  IV: 4660991-4665208
Chromosome . Primary Identifier  IV Chromosome Location . Start  4660991
Chromosome Location . End  4665208 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29B9.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017920 jmjd-1.2 F29B9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29B9.2b F29B9.2b 2694   IV: 4661009-4661191

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29B9.2b.1 4660991 4665208 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119812   201   IV: 4660991-4661191 Caenorhabditis elegans
Exon119815   72   IV: 4661239-4661310 Caenorhabditis elegans
Exon119820   189   IV: 4661453-4661641 Caenorhabditis elegans
Exon119822   403   IV: 4661806-4662208 Caenorhabditis elegans
Exon119825   127   IV: 4662263-4662389 Caenorhabditis elegans
Exon119828   321   IV: 4662748-4663068 Caenorhabditis elegans
Exon119831   232   IV: 4663121-4663352 Caenorhabditis elegans
Exon119834   373   IV: 4663671-4664043 Caenorhabditis elegans
Exon119837   738   IV: 4664098-4664835 Caenorhabditis elegans
Exon119840   323   IV: 4664886-4665208 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29B9.2b.1 4660991 4665208 1

1 Sequence

Length
2979

1 Sequence Ontology Term

Identifier Name Description
transcript