WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22B11.4a.1 Sequence Name  T22B11.4a.1
Length (nt)  1942   Chromosome Location  IV: 4679018-4682579
Chromosome . Primary Identifier  IV Chromosome Location . Start  4679018
Chromosome Location . End  4682579 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020678 kin-36 T22B11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22B11.4a T22B11.4a 1662   IV: 4679043-4679089

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22B11.4a.1 4679018 4682579 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119859   72   IV: 4679018-4679089 Caenorhabditis elegans
Exon119862   314   IV: 4679350-4679663 Caenorhabditis elegans
Exon119865   140   IV: 4679710-4679849 Caenorhabditis elegans
Exon119868   144   IV: 4679903-4680046 Caenorhabditis elegans
Exon119871   915   IV: 4680429-4681343 Caenorhabditis elegans
Exon119875   357   IV: 4682223-4682579 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22B11.4a.1 4679018 4682579 1

1 Sequence

Length
1942

1 Sequence Ontology Term

Identifier Name Description
transcript