WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22B11.4c.1 Sequence Name  T22B11.4c.1
Length (nt)  3302   Chromosome Location  IV: 4679043-4685732
Chromosome . Primary Identifier  IV Chromosome Location . Start  4679043
Chromosome Location . End  4685732 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B11.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020678 kin-36 T22B11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22B11.4c T22B11.4c 2679   IV: 4679043-4679089

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22B11.4c.1 4679043 4685732 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119861   47   IV: 4679043-4679089 Caenorhabditis elegans
Exon119864   314   IV: 4679350-4679663 Caenorhabditis elegans
Exon119867   140   IV: 4679710-4679849 Caenorhabditis elegans
Exon119870   144   IV: 4679903-4680046 Caenorhabditis elegans
Exon119872   915   IV: 4680429-4681343 Caenorhabditis elegans
Exon119874   69   IV: 4682223-4682291 Caenorhabditis elegans
Exon119876   148   IV: 4683016-4683163 Caenorhabditis elegans
Exon119877   87   IV: 4683215-4683301 Caenorhabditis elegans
Exon119878   120   IV: 4683416-4683535 Caenorhabditis elegans
Exon119879   293   IV: 4683825-4684117 Caenorhabditis elegans
Exon119880   324   IV: 4684437-4684760 Caenorhabditis elegans
Exon119881   701   IV: 4685032-4685732 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22B11.4c.1 4679043 4685732 1

1 Sequence

Length
3302

1 Sequence Ontology Term

Identifier Name Description
transcript