WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22B11.2.1 Sequence Name  T22B11.2.1
Length (nt)  1278   Chromosome Location  IV: 4688269-4691936
Chromosome . Primary Identifier  IV Chromosome Location . Start  4688269
Chromosome Location . End  4691936 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044620 bus-4 T22B11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22B11.2 T22B11.2 1107   IV: 4688330-4688377

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22B11.2.1 4688269 4691936 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119882   109   IV: 4688269-4688377 Caenorhabditis elegans
Exon119883   170   IV: 4688600-4688769 Caenorhabditis elegans
Exon119884   118   IV: 4689202-4689319 Caenorhabditis elegans
Exon119885   197   IV: 4689374-4689570 Caenorhabditis elegans
Exon119886   115   IV: 4690296-4690410 Caenorhabditis elegans
Exon119887   131   IV: 4690500-4690630 Caenorhabditis elegans
Exon119888   139   IV: 4690684-4690822 Caenorhabditis elegans
Exon119889   299   IV: 4691638-4691936 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22B11.2.1 4688269 4691936 1

1 Sequence

Length
1278

1 Sequence Ontology Term

Identifier Name Description
transcript