WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08F11.3.2 Sequence Name  K08F11.3.2
Length (nt)  1324   Chromosome Location  IV: 4706855-4710393
Chromosome . Primary Identifier  IV Chromosome Location . Start  4706855
Chromosome Location . End  4710393 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08F11.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019543 cif-1 K08F11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08F11.3 K08F11.3 1173   IV: 4707006-4707089

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08F11.3.2 4706855 4710393 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119913   235   IV: 4706855-4707089 Caenorhabditis elegans
Exon119915   186   IV: 4707142-4707327 Caenorhabditis elegans
Exon119917   330   IV: 4708258-4708587 Caenorhabditis elegans
Exon119919   461   IV: 4709322-4709782 Caenorhabditis elegans
Exon119921   112   IV: 4710282-4710393 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08F11.3.2 4706855 4710393 -1

1 Sequence

Length
1324

1 Sequence Ontology Term

Identifier Name Description
transcript