WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08F11.4b.1 Sequence Name  K08F11.4b.1
Length (nt)  1505   Chromosome Location  IV: 4710861-4712624
Chromosome . Primary Identifier  IV Chromosome Location . Start  4710861
Chromosome Location . End  4712624 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08F11.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006968 yars-2 K08F11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08F11.4b K08F11.4b 984   IV: 4710908-4711114

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08F11.4b.1 4710861 4712624 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119924   254   IV: 4710861-4711114 Caenorhabditis elegans
Exon119929   669   IV: 4711165-4711833 Caenorhabditis elegans
Exon119934   137   IV: 4711883-4712019 Caenorhabditis elegans
Exon119939   173   IV: 4712068-4712240 Caenorhabditis elegans
Exon119942   102   IV: 4712292-4712393 Caenorhabditis elegans
Exon119949   170   IV: 4712455-4712624 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08F11.4b.1 4710861 4712624 -1

1 Sequence

Length
1505

1 Sequence Ontology Term

Identifier Name Description
transcript