WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E04A4.7.2 Sequence Name  E04A4.7.2
Length (nt)  549   Chromosome Location  IV: 4747895-4749012
Chromosome . Primary Identifier  IV Chromosome Location . Start  4747895
Chromosome Location . End  4749012 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E04A4.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017121 cyc-2.1 E04A4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E04A4.7 E04A4.7 336   IV: 4748055-4748210

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E04A4.7.2 4747895 4749012 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120065   316   IV: 4747895-4748210 Caenorhabditis elegans
Exon120068   188   IV: 4748262-4748449 Caenorhabditis elegans
Exon120069   45   IV: 4748968-4749012 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E04A4.7.2 4747895 4749012 -1

1 Sequence

Length
549

1 Sequence Ontology Term

Identifier Name Description
transcript