WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11E3.2.1 Sequence Name  R11E3.2.1
Length (nt)  1668   Chromosome Location  IV: 4772092-4775133
Chromosome . Primary Identifier  IV Chromosome Location . Start  4772092
Chromosome Location . End  4775133 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11E3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020004 R11E3.2 R11E3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11E3.2 R11E3.2 1641   IV: 4772119-4772202

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11E3.2.1 4772092 4775133 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120065   111   IV: 4772092-4772202 Caenorhabditis elegans
Exon120066   89   IV: 4772885-4772973 Caenorhabditis elegans
Exon120067   72   IV: 4773021-4773092 Caenorhabditis elegans
Exon120068   118   IV: 4773138-4773255 Caenorhabditis elegans
Exon120069   179   IV: 4773403-4773581 Caenorhabditis elegans
Exon120070   124   IV: 4773629-4773752 Caenorhabditis elegans
Exon120071   241   IV: 4773796-4774036 Caenorhabditis elegans
Exon120073   326   IV: 4774170-4774495 Caenorhabditis elegans
Exon120074   199   IV: 4774542-4774740 Caenorhabditis elegans
Exon120075   103   IV: 4774781-4774883 Caenorhabditis elegans
Exon120076   106   IV: 4775028-4775133 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11E3.2.1 4772092 4775133 1

1 Sequence

Length
1668

1 Sequence Ontology Term

Identifier Name Description
transcript