WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11E3.5d.1 Sequence Name  R11E3.5d.1
Length (nt)  978   Chromosome Location  IV: 4784556-4787726
Chromosome . Primary Identifier  IV Chromosome Location . Start  4784556
Chromosome Location . End  4787726 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11E3.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003694 nhr-104 R11E3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11E3.5d R11E3.5d 978   IV: 4784556-4784653

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11E3.5d.1 4784556 4787726 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120108   98   IV: 4784556-4784653 Caenorhabditis elegans
Exon120113   97   IV: 4785152-4785248 Caenorhabditis elegans
Exon120116   152   IV: 4785299-4785450 Caenorhabditis elegans
Exon120120   116   IV: 4786310-4786425 Caenorhabditis elegans
Exon120124   185   IV: 4786766-4786950 Caenorhabditis elegans
Exon120128   126   IV: 4787290-4787415 Caenorhabditis elegans
Exon120132   191   IV: 4787470-4787660 Caenorhabditis elegans
Exon120133   13   IV: 4787714-4787726 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11E3.5d.1 4784556 4787726 -1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
transcript