WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R11E3.5b Sequence Name  R11E3.5b
Length (nt)  729   Chromosome Location  IV: 4786762-4786950
Chromosome . Primary Identifier  IV Chromosome Location . Start  4786762
Chromosome Location . End  4786950
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11E3.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31720 NHR-104, isoform b 28.2 242 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051791
WBRNAi00022424
WBRNAi00115809

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R11E3.5b 4786762 4786950 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003694 nhr-104 R11E3.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:R11E3.5b 4786762 4786950 -1
CDS:R11E3.5b 4787290 4787415 -1
CDS:R11E3.5b 4787470 4787660 -1
CDS:R11E3.5b 4787714 4787779 -1
CDS:R11E3.5b 4787917 4788002 -1
CDS:R11E3.5b 4788366 4788436 -1

1 Sequence

Length
729

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R11E3.5b.1 R11E3.5b.1 2409   IV: 4785129-4788483