WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11E3.7b.1 Sequence Name  R11E3.7b.1
Length (nt)  2138   Chromosome Location  IV: 4799393-4802594
Chromosome . Primary Identifier  IV Chromosome Location . Start  4799393
Chromosome Location . End  4802594 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11E3.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001060 dpf-7 R11E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11E3.7b R11E3.7b 495   IV: 4802008-4802118

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11E3.7b.1 4799393 4802594 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120175   557   IV: 4799393-4799949 Caenorhabditis elegans
Exon120177   117   IV: 4800236-4800352 Caenorhabditis elegans
Exon120180   139   IV: 4800400-4800538 Caenorhabditis elegans
Exon120182   362   IV: 4800743-4801104 Caenorhabditis elegans
Exon120185   147   IV: 4801155-4801301 Caenorhabditis elegans
Exon120187   386   IV: 4801733-4802118 Caenorhabditis elegans
Exon120192   430   IV: 4802165-4802594 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11E3.7b.1 4799393 4802594 -1

1 Sequence

Length
2138

1 Sequence Ontology Term

Identifier Name Description
transcript