WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11E3.6a.1 Sequence Name  R11E3.6a.1
Length (nt)  2930   Chromosome Location  IV: 4793194-4799178
Chromosome . Primary Identifier  IV Chromosome Location . Start  4793194
Chromosome Location . End  4799178 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11E3.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001324 eor-1 R11E3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11E3.6a R11E3.6a 2730   IV: 4793392-4793644

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11E3.6a.1 4793194 4799178 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120208   451   IV: 4793194-4793644 Caenorhabditis elegans
Exon120210   290   IV: 4793707-4793996 Caenorhabditis elegans
Exon120212   183   IV: 4794426-4794608 Caenorhabditis elegans
Exon120215   209   IV: 4794659-4794867 Caenorhabditis elegans
Exon120216   101   IV: 4795519-4795619 Caenorhabditis elegans
Exon120217   184   IV: 4795829-4796012 Caenorhabditis elegans
Exon120219   199   IV: 4796469-4796667 Caenorhabditis elegans
Exon120220   185   IV: 4797442-4797626 Caenorhabditis elegans
Exon120221   74   IV: 4797729-4797802 Caenorhabditis elegans
Exon120222   258   IV: 4797851-4798108 Caenorhabditis elegans
Exon120223   174   IV: 4798164-4798337 Caenorhabditis elegans
Exon120224   143   IV: 4798383-4798525 Caenorhabditis elegans
Exon120225   114   IV: 4798584-4798697 Caenorhabditis elegans
Exon120226   281   IV: 4798753-4799033 Caenorhabditis elegans
Exon120227   84   IV: 4799095-4799178 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11E3.6a.1 4793194 4799178 -1

1 Sequence

Length
2930

1 Sequence Ontology Term

Identifier Name Description
transcript