WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H06H21.6.1 Sequence Name  H06H21.6.1
Length (nt)  1488   Chromosome Location  IV: 4807426-4809497
Chromosome . Primary Identifier  IV Chromosome Location . Start  4807426
Chromosome Location . End  4809497 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06H21.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019163 ubxn-6 H06H21.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H06H21.6 H06H21.6 1314   IV: 4807590-4807853

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.6.1 4807426 4809497 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120208   428   IV: 4807426-4807853 Caenorhabditis elegans
Exon120210   111   IV: 4807907-4808017 Caenorhabditis elegans
Exon120211   402   IV: 4808067-4808468 Caenorhabditis elegans
Exon120213   547   IV: 4808951-4809497 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.6.1 4807426 4809497 -1

1 Sequence

Length
1488

1 Sequence Ontology Term

Identifier Name Description
transcript