WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H06H21.2.1 Sequence Name  H06H21.2.1
Length (nt)  1200   Chromosome Location  IV: 4812075-4814029
Chromosome . Primary Identifier  IV Chromosome Location . Start  4812075
Chromosome Location . End  4814029 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06H21.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005842 srw-95 H06H21.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H06H21.2 H06H21.2 1146   IV: 4812129-4812229

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.2.1 4812075 4814029 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120219   155   IV: 4812075-4812229 Caenorhabditis elegans
Exon120220   219   IV: 4812277-4812495 Caenorhabditis elegans
Exon120221   279   IV: 4812657-4812935 Caenorhabditis elegans
Exon120222   127   IV: 4812983-4813109 Caenorhabditis elegans
Exon120223   248   IV: 4813187-4813434 Caenorhabditis elegans
Exon120225   130   IV: 4813808-4813937 Caenorhabditis elegans
Exon120226   42   IV: 4813988-4814029 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.2.1 4812075 4814029 1

1 Sequence

Length
1200

1 Sequence Ontology Term

Identifier Name Description
transcript