WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H06H21.10e.1 Sequence Name  H06H21.10e.1
Length (nt)  4155   Chromosome Location  IV: 4827853-4846893
Chromosome . Primary Identifier  IV Chromosome Location . Start  4827853
Chromosome Location . End  4846893 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06H21.10e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019166 tat-2 H06H21.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H06H21.10e H06H21.10e 3918   IV: 4828090-4828111

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.10e.1 4827853 4846893 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120266   259   IV: 4827853-4828111 Caenorhabditis elegans
Exon120275   98   IV: 4828751-4828848 Caenorhabditis elegans
Exon120283   217   IV: 4829370-4829586 Caenorhabditis elegans
Exon120290   329   IV: 4829806-4830134 Caenorhabditis elegans
Exon120298   133   IV: 4830942-4831074 Caenorhabditis elegans
Exon120305   394   IV: 4831469-4831862 Caenorhabditis elegans
Exon120312   151   IV: 4832638-4832788 Caenorhabditis elegans
Exon120318   149   IV: 4832916-4833064 Caenorhabditis elegans
Exon120324   88   IV: 4833110-4833197 Caenorhabditis elegans
Exon120333   144   IV: 4834287-4834430 Caenorhabditis elegans
Exon120342   198   IV: 4834637-4834834 Caenorhabditis elegans
Exon120348   126   IV: 4834891-4835016 Caenorhabditis elegans
Exon120357   423   IV: 4835823-4836245 Caenorhabditis elegans
Exon120364   69   IV: 4837247-4837315 Caenorhabditis elegans
Exon120371   281   IV: 4837452-4837732 Caenorhabditis elegans
Exon120379   378   IV: 4838886-4839263 Caenorhabditis elegans
Exon120386   154   IV: 4839455-4839608 Caenorhabditis elegans
Exon120395   135   IV: 4840116-4840250 Caenorhabditis elegans
Exon120403   99   IV: 4840395-4840493 Caenorhabditis elegans
Exon120409   114   IV: 4840543-4840656 Caenorhabditis elegans
Exon120419   155   IV: 4841017-4841171 Caenorhabditis elegans
Exon120424   57   IV: 4841707-4841763 Caenorhabditis elegans
Exon120440   4   IV: 4846890-4846893 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.10e.1 4827853 4846893 -1

1 Sequence

Length
4155

1 Sequence Ontology Term

Identifier Name Description
transcript