WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H06H21.10a.1 Sequence Name  H06H21.10a.1
Length (nt)  4168   Chromosome Location  IV: 4827853-4841127
Chromosome . Primary Identifier  IV Chromosome Location . Start  4827853
Chromosome Location . End  4841127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06H21.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019166 tat-2 H06H21.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H06H21.10a H06H21.10a 3945   IV: 4828076-4828111

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.10a.1 4827853 4841127 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120265   259   IV: 4827853-4828111 Caenorhabditis elegans
Exon120269   118   IV: 4828527-4828644 Caenorhabditis elegans
Exon120273   98   IV: 4828751-4828848 Caenorhabditis elegans
Exon120279   217   IV: 4829370-4829586 Caenorhabditis elegans
Exon120286   329   IV: 4829806-4830134 Caenorhabditis elegans
Exon120294   133   IV: 4830942-4831074 Caenorhabditis elegans
Exon120301   394   IV: 4831469-4831862 Caenorhabditis elegans
Exon120308   151   IV: 4832638-4832788 Caenorhabditis elegans
Exon120314   149   IV: 4832916-4833064 Caenorhabditis elegans
Exon120320   88   IV: 4833110-4833197 Caenorhabditis elegans
Exon120329   144   IV: 4834287-4834430 Caenorhabditis elegans
Exon120338   198   IV: 4834637-4834834 Caenorhabditis elegans
Exon120344   126   IV: 4834891-4835016 Caenorhabditis elegans
Exon120353   423   IV: 4835823-4836245 Caenorhabditis elegans
Exon120360   69   IV: 4837247-4837315 Caenorhabditis elegans
Exon120367   281   IV: 4837452-4837732 Caenorhabditis elegans
Exon120375   378   IV: 4838886-4839263 Caenorhabditis elegans
Exon120382   154   IV: 4839455-4839608 Caenorhabditis elegans
Exon120391   135   IV: 4840116-4840250 Caenorhabditis elegans
Exon120399   99   IV: 4840395-4840493 Caenorhabditis elegans
Exon120405   114   IV: 4840543-4840656 Caenorhabditis elegans
Exon120415   111   IV: 4841017-4841127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.10a.1 4827853 4841127 -1

1 Sequence

Length
4168

1 Sequence Ontology Term

Identifier Name Description
transcript