WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H06H21.10b.1 Sequence Name  H06H21.10b.1
Length (nt)  4050   Chromosome Location  IV: 4827853-4841127
Chromosome . Primary Identifier  IV Chromosome Location . Start  4827853
Chromosome Location . End  4841127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06H21.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019166 tat-2 H06H21.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H06H21.10b H06H21.10b 3813   IV: 4828090-4828111

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.10b.1 4827853 4841127 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120268   259   IV: 4827853-4828111 Caenorhabditis elegans
Exon120274   98   IV: 4828751-4828848 Caenorhabditis elegans
Exon120280   217   IV: 4829370-4829586 Caenorhabditis elegans
Exon120287   329   IV: 4829806-4830134 Caenorhabditis elegans
Exon120295   133   IV: 4830942-4831074 Caenorhabditis elegans
Exon120302   394   IV: 4831469-4831862 Caenorhabditis elegans
Exon120309   151   IV: 4832638-4832788 Caenorhabditis elegans
Exon120315   149   IV: 4832916-4833064 Caenorhabditis elegans
Exon120321   88   IV: 4833110-4833197 Caenorhabditis elegans
Exon120330   144   IV: 4834287-4834430 Caenorhabditis elegans
Exon120339   198   IV: 4834637-4834834 Caenorhabditis elegans
Exon120345   126   IV: 4834891-4835016 Caenorhabditis elegans
Exon120354   423   IV: 4835823-4836245 Caenorhabditis elegans
Exon120361   69   IV: 4837247-4837315 Caenorhabditis elegans
Exon120368   281   IV: 4837452-4837732 Caenorhabditis elegans
Exon120376   378   IV: 4838886-4839263 Caenorhabditis elegans
Exon120383   154   IV: 4839455-4839608 Caenorhabditis elegans
Exon120392   135   IV: 4840116-4840250 Caenorhabditis elegans
Exon120400   99   IV: 4840395-4840493 Caenorhabditis elegans
Exon120406   114   IV: 4840543-4840656 Caenorhabditis elegans
Exon120416   111   IV: 4841017-4841127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.10b.1 4827853 4841127 -1

1 Sequence

Length
4050

1 Sequence Ontology Term

Identifier Name Description
transcript