WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H06H21.10d.1 Sequence Name  H06H21.10d.1
Length (nt)  3900   Chromosome Location  IV: 4828747-4846893
Chromosome . Primary Identifier  IV Chromosome Location . Start  4828747
Chromosome Location . End  4846893 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06H21.10d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019166 tat-2 H06H21.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H06H21.10d H06H21.10d 3900   IV: 4828747-4828848

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.10d.1 4828747 4846893 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120272   102   IV: 4828747-4828848 Caenorhabditis elegans
Exon120282   217   IV: 4829370-4829586 Caenorhabditis elegans
Exon120289   329   IV: 4829806-4830134 Caenorhabditis elegans
Exon120297   133   IV: 4830942-4831074 Caenorhabditis elegans
Exon120304   394   IV: 4831469-4831862 Caenorhabditis elegans
Exon120311   151   IV: 4832638-4832788 Caenorhabditis elegans
Exon120317   149   IV: 4832916-4833064 Caenorhabditis elegans
Exon120323   88   IV: 4833110-4833197 Caenorhabditis elegans
Exon120332   144   IV: 4834287-4834430 Caenorhabditis elegans
Exon120341   198   IV: 4834637-4834834 Caenorhabditis elegans
Exon120347   126   IV: 4834891-4835016 Caenorhabditis elegans
Exon120356   423   IV: 4835823-4836245 Caenorhabditis elegans
Exon120363   69   IV: 4837247-4837315 Caenorhabditis elegans
Exon120370   281   IV: 4837452-4837732 Caenorhabditis elegans
Exon120378   378   IV: 4838886-4839263 Caenorhabditis elegans
Exon120385   154   IV: 4839455-4839608 Caenorhabditis elegans
Exon120394   135   IV: 4840116-4840250 Caenorhabditis elegans
Exon120402   99   IV: 4840395-4840493 Caenorhabditis elegans
Exon120408   114   IV: 4840543-4840656 Caenorhabditis elegans
Exon120418   155   IV: 4841017-4841171 Caenorhabditis elegans
Exon120423   57   IV: 4841707-4841763 Caenorhabditis elegans
Exon120439   4   IV: 4846890-4846893 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H06H21.10d.1 4828747 4846893 -1

1 Sequence

Length
3900

1 Sequence Ontology Term

Identifier Name Description
transcript