WormMine: Gene WBGene00235209

• WormBase Gene ID: WBGene00235209
• Gene Name: Y17G9A.90
• Sequence Name: Y17G9A.90
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by mett-10 based on RNA-seq studies.
• Biotype: SO:0001268
• Genetic Position: :±
• Length (nt): 102

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00235209

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y17G9A.90	Y17G9A.90	102	IV: 4866811-4866912

Other

0 CDSs

7 RNAi Result

• WBRNAi00048265
• WBRNAi00051485
• WBRNAi00051486
• WBRNAi00015588
• WBRNAi00006349
• WBRNAi00006782
• WBRNAi00006930

6 Allele

• gk964500
• gk963722
• gk963150
• WBVar02121203
• gk495423
• gk367230

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00235209
• Start: 4866811
• End: 4866912
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in VC1743[mett-10(ok2204)] comparing to in N2 when animals grow on standard (OP50) plates.	DESeq2, p-value < 0.05, fold change > 2.	WBPaper00061357:mett-10(ok2204)_downregulated_OP50
	Transcripts that showed significantly decreased expression in VC1743[mett-10(ok2204)] comparing to in N2 when animals grow on peptone-rich (NA22) plates.	DESeq2, p-value < 0.05, fold change > 2.	WBPaper00061357:mett-10(ok2204)_downregulated_NA22

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00235209
• Start: 4866811
• End: 4866912
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 102

1 Sequence Ontology Term