WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B6.7.1 Sequence Name  T08B6.7.1
Length (nt)  1041   Chromosome Location  IV: 4877402-4880315
Chromosome . Primary Identifier  IV Chromosome Location . Start  4877402
Chromosome Location . End  4880315 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B6.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006214 str-170 T08B6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B6.7 T08B6.7 1041   IV: 4877402-4877599

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B6.7.1 4877402 4880315 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120557   198   IV: 4877402-4877599 Caenorhabditis elegans
Exon120560   88   IV: 4877675-4877762 Caenorhabditis elegans
Exon120564   79   IV: 4878162-4878240 Caenorhabditis elegans
Exon120567   135   IV: 4878863-4878997 Caenorhabditis elegans
Exon120568   274   IV: 4879049-4879322 Caenorhabditis elegans
Exon120571   178   IV: 4880003-4880180 Caenorhabditis elegans
Exon120572   89   IV: 4880227-4880315 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B6.7.1 4877402 4880315 1

1 Sequence

Length
1041

1 Sequence Ontology Term

Identifier Name Description
transcript