WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B6.5.1 Sequence Name  T08B6.5.1
Length (nt)  722   Chromosome Location  IV: 4889913-4890686
Chromosome . Primary Identifier  IV Chromosome Location . Start  4889913
Chromosome Location . End  4890686 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020354 sgnh-1 T08B6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B6.5 T08B6.5 534   IV: 4889929-4890191

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B6.5.1 4889913 4890686 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120603   279   IV: 4889913-4890191 Caenorhabditis elegans
Exon120605   443   IV: 4890244-4890686 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B6.5.1 4889913 4890686 1

1 Sequence

Length
722

1 Sequence Ontology Term

Identifier Name Description
transcript