WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B6.4.1 Sequence Name  T08B6.4.1
Length (nt)  2021   Chromosome Location  IV: 4905695-4908500
Chromosome . Primary Identifier  IV Chromosome Location . Start  4905695
Chromosome Location . End  4908500 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020353 T08B6.4 T08B6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B6.4 T08B6.4 1896   IV: 4906064-4906654

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B6.4.1 4905695 4908500 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120711   62   IV: 4905695-4905756 Caenorhabditis elegans
Exon120712   612   IV: 4906043-4906654 Caenorhabditis elegans
Exon120713   156   IV: 4906723-4906878 Caenorhabditis elegans
Exon120714   552   IV: 4907003-4907554 Caenorhabditis elegans
Exon120715   377   IV: 4907685-4908061 Caenorhabditis elegans
Exon120716   262   IV: 4908239-4908500 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B6.4.1 4905695 4908500 1

1 Sequence

Length
2021

1 Sequence Ontology Term

Identifier Name Description
transcript