WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y9C9A.10.1 Sequence Name  Y9C9A.10.1
Length (nt)  1023   Chromosome Location  IV: 4915989-4917553
Chromosome . Primary Identifier  IV Chromosome Location . Start  4915989
Chromosome Location . End  4917553 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y9C9A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006201 str-155 Y9C9A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y9C9A.10 Y9C9A.10 1023   IV: 4915989-4916180

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y9C9A.10.1 4915989 4917553 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120746   192   IV: 4915989-4916180 Caenorhabditis elegans
Exon120747   94   IV: 4916229-4916322 Caenorhabditis elegans
Exon120748   79   IV: 4916373-4916451 Caenorhabditis elegans
Exon120749   132   IV: 4916712-4916843 Caenorhabditis elegans
Exon120750   139   IV: 4916893-4917031 Caenorhabditis elegans
Exon120751   132   IV: 4917081-4917212 Caenorhabditis elegans
Exon120752   178   IV: 4917258-4917435 Caenorhabditis elegans
Exon120753   77   IV: 4917477-4917553 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y9C9A.10.1 4915989 4917553 1

1 Sequence

Length
1023

1 Sequence Ontology Term

Identifier Name Description
transcript