WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y9C9A.9.1 Sequence Name  Y9C9A.9.1
Length (nt)  1017   Chromosome Location  IV: 4918074-4919632
Chromosome . Primary Identifier  IV Chromosome Location . Start  4918074
Chromosome Location . End  4919632 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y9C9A.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006203 str-158 Y9C9A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y9C9A.9 Y9C9A.9 1017   IV: 4918074-4918265

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y9C9A.9.1 4918074 4919632 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120754   192   IV: 4918074-4918265 Caenorhabditis elegans
Exon120755   94   IV: 4918311-4918404 Caenorhabditis elegans
Exon120758   79   IV: 4918451-4918529 Caenorhabditis elegans
Exon120759   132   IV: 4918666-4918797 Caenorhabditis elegans
Exon120760   139   IV: 4918964-4919102 Caenorhabditis elegans
Exon120761   132   IV: 4919147-4919278 Caenorhabditis elegans
Exon120762   178   IV: 4919339-4919516 Caenorhabditis elegans
Exon120763   71   IV: 4919562-4919632 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y9C9A.9.1 4918074 4919632 1

1 Sequence

Length
1017

1 Sequence Ontology Term

Identifier Name Description
transcript