WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y9C9A.7.1 Sequence Name  Y9C9A.7.1
Length (nt)  1132   Chromosome Location  IV: 4934403-4936741
Chromosome . Primary Identifier  IV Chromosome Location . Start  4934403
Chromosome Location . End  4936741 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y9C9A.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006199 str-153 Y9C9A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y9C9A.7 Y9C9A.7 1023   IV: 4934414-4934605

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y9C9A.7.1 4934403 4936741 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120785   203   IV: 4934403-4934605 Caenorhabditis elegans
Exon120787   88   IV: 4934786-4934873 Caenorhabditis elegans
Exon120791   79   IV: 4934995-4935073 Caenorhabditis elegans
Exon120792   135   IV: 4935267-4935401 Caenorhabditis elegans
Exon120793   142   IV: 4935443-4935584 Caenorhabditis elegans
Exon120797   132   IV: 4935804-4935935 Caenorhabditis elegans
Exon120798   178   IV: 4936344-4936521 Caenorhabditis elegans
Exon120799   175   IV: 4936567-4936741 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y9C9A.7.1 4934403 4936741 1

1 Sequence

Length
1132

1 Sequence Ontology Term

Identifier Name Description
transcript