WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y9C9A.6.1 Sequence Name  Y9C9A.6.1
Length (nt)  1536   Chromosome Location  IV: 4938964-4941523
Chromosome . Primary Identifier  IV Chromosome Location . Start  4938964
Chromosome Location . End  4941523 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y9C9A.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006212 str-168 Y9C9A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y9C9A.6 Y9C9A.6 1023   IV: 4939348-4939536

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y9C9A.6.1 4938964 4941523 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120808   573   IV: 4938964-4939536 Caenorhabditis elegans
Exon120810   88   IV: 4939582-4939669 Caenorhabditis elegans
Exon120811   79   IV: 4939721-4939799 Caenorhabditis elegans
Exon120812   135   IV: 4940185-4940319 Caenorhabditis elegans
Exon120815   142   IV: 4940381-4940522 Caenorhabditis elegans
Exon120816   132   IV: 4940572-4940703 Caenorhabditis elegans
Exon120819   178   IV: 4941020-4941197 Caenorhabditis elegans
Exon120820   209   IV: 4941315-4941523 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y9C9A.6.1 4938964 4941523 1

1 Sequence

Length
1536

1 Sequence Ontology Term

Identifier Name Description
transcript