WormMine: Gene WBGene00219747

• WormBase Gene ID: WBGene00219747
• Gene Name: linc-79
• Sequence Name: Y9C9A.110
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in AIAL; AIYL; AIYR; and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by dpy-21 based on RNA-seq studies.
• Biotype: SO:0001641
• Genetic Position: IV :1.39448±
• Length (nt): 370

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00219747

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y9C9A.110	Y9C9A.110	370	IV: 4975715-4976084

Other

0 CDSs

1 RNAi Result

• WBRNAi00021552

10 Allele

• gk964500
• gk963722
• gk963867
• gk963150
• gk963980
• gk621421
• gk782456
• gk427469
• WBVar01630814
• WBVar01953878

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00219747
• Start: 4975715
• End: 4976084
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology.	DESEQ2, fold change > 2 and FDR < 0.01.	WBPaper00062103:neuron_enriched
	Transcripts that showed significantly increased expression in dpy-21(e428) comparing to in N2 during L3 stage.	DESeq v1.6.3. Fold change > 1.5.	WBPaper00050370:dpy-21(e428)_L3_upregulated
	Single-cell RNA-Seq cell group 112_0 expressed in neuron.	scVI 0.6.0	WBPaper00065841:112_0

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00219747
• Start: 4975715
• End: 4976084
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 370

1 Sequence Ontology Term