WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y9C9A.16a Sequence Name  Y9C9A.16a
Length (nt)  1086   Chromosome Location  IV: 4973622-4973858
Chromosome . Primary Identifier  IV Chromosome Location . Start  4973622
Chromosome Location . End  4973858
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y9C9A.16a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39879 Y9C9A.16, isoform a 40.6 361 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00021552
WBRNAi00058704
WBRNAi00058705

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y9C9A.16a 4973622 4973858 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021183 Y9C9A.16 Y9C9A.16 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y9C9A.16a 4973622 4973858 -1
CDS:Y9C9A.16a 4974261 4974404 -1
CDS:Y9C9A.16a 4974447 4974554 -1
CDS:Y9C9A.16a 4974634 4974804 -1
CDS:Y9C9A.16a 4974915 4975061 -1
CDS:Y9C9A.16a 4975104 4975202 -1
CDS:Y9C9A.16a 4975325 4975504 -1

1 Sequence

Length
1086

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y9C9A.16a.1 Y9C9A.16a.1 1184   IV: 4973524-4975504