WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E03H12.2.1 Sequence Name  E03H12.2.1
Length (nt)  894   Chromosome Location  IV: 4986546-4987725
Chromosome . Primary Identifier  IV Chromosome Location . Start  4986546
Chromosome Location . End  4987725 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E03H12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017109 clec-177 E03H12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E03H12.2 E03H12.2 894   IV: 4986546-4986659

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E03H12.2.1 4986546 4987725 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120933   114   IV: 4986546-4986659 Caenorhabditis elegans
Exon120934   159   IV: 4986703-4986861 Caenorhabditis elegans
Exon120936   123   IV: 4986905-4987027 Caenorhabditis elegans
Exon120937   112   IV: 4987079-4987190 Caenorhabditis elegans
Exon120938   122   IV: 4987239-4987360 Caenorhabditis elegans
Exon120939   152   IV: 4987404-4987555 Caenorhabditis elegans
Exon120940   112   IV: 4987614-4987725 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E03H12.2.1 4986546 4987725 1

1 Sequence

Length
894

1 Sequence Ontology Term

Identifier Name Description
transcript