WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28H11.4a Sequence Name  T28H11.4a
Length (nt)  795   Chromosome Location  IV: 5002752-5002848
Chromosome . Primary Identifier  IV Chromosome Location . Start  5002752
Chromosome Location . End  5002848
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28H11.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE14375 PES-1, isoform a 29.5 264 Caenorhabditis elegans
 

Other

33 RNAi

WormBase ID
WBRNAi00075635
WBRNAi00054452
WBRNAi00030279
WBRNAi00075637
WBRNAi00104890
WBRNAi00113579
WBRNAi00104892
WBRNAi00104891
WBRNAi00104894
WBRNAi00104893
WBRNAi00104896
WBRNAi00104895
WBRNAi00104898
WBRNAi00019421
WBRNAi00104897
WBRNAi00104900
WBRNAi00104899
WBRNAi00104902
WBRNAi00104901
WBRNAi00104904
WBRNAi00104903
WBRNAi00104906
WBRNAi00104905
WBRNAi00104908
WBRNAi00104907
WBRNAi00104910
WBRNAi00104909
WBRNAi00104912
WBRNAi00104911
WBRNAi00104914

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28H11.4a 5002752 5002848 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003976 pes-1 T28H11.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28H11.4a 5002752 5002848 1
CDS:T28H11.4a 5004403 5004489 1
CDS:T28H11.4a 5004567 5004629 1
CDS:T28H11.4a 5004753 5004989 1
CDS:T28H11.4a 5005037 5005347 1

1 Sequence

Length
795

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28H11.4a.1 T28H11.4a.1 938   IV: 5002748-5005486