WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28H11.2 Sequence Name  T28H11.2
Length (nt)  996   Chromosome Location  IV: 5012549-5012752
Chromosome . Primary Identifier  IV Chromosome Location . Start  5012549
Chromosome Location . End  5012752
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28H11.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26015 SRM-1 37.5 331 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00054450
WBRNAi00019419

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28H11.2 5012549 5012752 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005638 srm-1 T28H11.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28H11.2 5012549 5012752 1
CDS:T28H11.2 5012801 5012873 1
CDS:T28H11.2 5013156 5013249 1
CDS:T28H11.2 5013763 5014150 1
CDS:T28H11.2 5014316 5014471 1
CDS:T28H11.2 5014524 5014604 1

1 Sequence

Length
996

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28H11.2.1 T28H11.2.1 1242   IV: 5012541-5014842