WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09B9.85.1 Sequence Name  C09B9.85.1
Length (nt)  1904   Chromosome Location  IV: 5021126-5025746
Chromosome . Primary Identifier  IV Chromosome Location . Start  5021126
Chromosome Location . End  5025746 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09B9.85.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00220250 C09B9.85 C09B9.85 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09B9.85 C09B9.85 1668   IV: 5021362-5021596

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09B9.85.1 5021126 5025746 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121037   471   IV: 5021126-5021596 Caenorhabditis elegans
Exon121038   173   IV: 5021645-5021817 Caenorhabditis elegans
Exon121039   153   IV: 5022434-5022586 Caenorhabditis elegans
Exon121043   225   IV: 5023722-5023946 Caenorhabditis elegans
Exon121044   125   IV: 5023991-5024115 Caenorhabditis elegans
Exon121045   73   IV: 5024159-5024231 Caenorhabditis elegans
Exon121046   373   IV: 5024392-5024764 Caenorhabditis elegans
Exon121047   135   IV: 5025344-5025478 Caenorhabditis elegans
Exon121048   119   IV: 5025523-5025641 Caenorhabditis elegans
Exon121049   57   IV: 5025690-5025746 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09B9.85.1 5021126 5025746 -1

1 Sequence

Length
1904

1 Sequence Ontology Term

Identifier Name Description
transcript