WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13H9.5.1 Sequence Name  R13H9.5.1
Length (nt)  1086   Chromosome Location  IV: 5065673-5066987
Chromosome . Primary Identifier  IV Chromosome Location . Start  5065673
Chromosome Location . End  5066987 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13H9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020071 ttbk-2.2 R13H9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13H9.5 R13H9.5 936   IV: 5065752-5065841

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13H9.5.1 5065673 5066987 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121183   169   IV: 5065673-5065841 Caenorhabditis elegans
Exon121184   232   IV: 5065889-5066120 Caenorhabditis elegans
Exon121185   92   IV: 5066166-5066257 Caenorhabditis elegans
Exon121186   219   IV: 5066307-5066525 Caenorhabditis elegans
Exon121187   255   IV: 5066571-5066825 Caenorhabditis elegans
Exon121188   119   IV: 5066869-5066987 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13H9.5.1 5065673 5066987 -1

1 Sequence

Length
1086

1 Sequence Ontology Term

Identifier Name Description
transcript