WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09B9.7.1 Sequence Name  C09B9.7.1
Length (nt)  3328   Chromosome Location  IV: 5056912-5061084
Chromosome . Primary Identifier  IV Chromosome Location . Start  5056912
Chromosome Location . End  5061084 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09B9.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015630 C09B9.7 C09B9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09B9.7 C09B9.7 3117   IV: 5056973-5057030

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09B9.7.1 5056912 5061084 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121225   119   IV: 5056912-5057030 Caenorhabditis elegans
Exon121226   93   IV: 5057077-5057169 Caenorhabditis elegans
Exon121227   318   IV: 5057217-5057534 Caenorhabditis elegans
Exon121228   2356   IV: 5057579-5059934 Caenorhabditis elegans
Exon121230   96   IV: 5060426-5060521 Caenorhabditis elegans
Exon121231   84   IV: 5060572-5060655 Caenorhabditis elegans
Exon121232   73   IV: 5060702-5060774 Caenorhabditis elegans
Exon121233   78   IV: 5060824-5060901 Caenorhabditis elegans
Exon121234   111   IV: 5060974-5061084 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09B9.7.1 5056912 5061084 -1

1 Sequence

Length
3328

1 Sequence Ontology Term

Identifier Name Description
transcript