WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:AC7.1b Sequence Name  AC7.1b
Length (nt)  1158   Chromosome Location  IV: 5113027-5113137
Chromosome . Primary Identifier  IV Chromosome Location . Start  5113027
Chromosome Location . End  5113137
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
AC7.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52241 TKR-3, isoform b 44.3 385 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00001811
WBRNAi00038601
WBRNAi00072189
WBRNAi00024343
WBRNAi00008277
WBRNAi00027920
WBRNAi00085528

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:AC7.1b 5113027 5113137 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006428 tkr-3 AC7.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:AC7.1b 5113027 5113137 -1
CDS:AC7.1b 5113311 5113391 -1
CDS:AC7.1b 5113816 5114007 -1
CDS:AC7.1b 5114775 5114954 -1
CDS:AC7.1b 5115392 5115655 -1
CDS:AC7.1b 5117430 5117532 -1
CDS:AC7.1b 5118665 5118753 -1
CDS:AC7.1b 5121882 5122019 -1

1 Sequence

Length
1158

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:AC7.1b.1 AC7.1b.1 1281   IV: 5112980-5122095