WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03F8.5a.1 Sequence Name  W03F8.5a.1
Length (nt)  5901   Chromosome Location  IV: 5173332-5183746
Chromosome . Primary Identifier  IV Chromosome Location . Start  5173332
Chromosome Location . End  5183746 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03F8.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002247 lam-1 W03F8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03F8.5a W03F8.5a 5373   IV: 5173332-5173627

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03F8.5a.1 5173332 5183746 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121522   296   IV: 5173332-5173627 Caenorhabditis elegans
Exon121524   468   IV: 5174578-5175045 Caenorhabditis elegans
Exon121527   326   IV: 5175507-5175832 Caenorhabditis elegans
Exon121530   161   IV: 5176002-5176162 Caenorhabditis elegans
Exon121534   389   IV: 5176750-5177138 Caenorhabditis elegans
Exon121536   1230   IV: 5177550-5178779 Caenorhabditis elegans
Exon121539   240   IV: 5178992-5179231 Caenorhabditis elegans
Exon121545   1642   IV: 5179957-5181598 Caenorhabditis elegans
Exon121547   351   IV: 5181737-5182087 Caenorhabditis elegans
Exon121551   139   IV: 5182874-5183012 Caenorhabditis elegans
Exon121554   659   IV: 5183088-5183746 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03F8.5a.1 5173332 5183746 1

1 Sequence

Length
5901

1 Sequence Ontology Term

Identifier Name Description
transcript