WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W03F8.5a Sequence Name  W03F8.5a
Length (nt)  5373   Chromosome Location  IV: 5173332-5173627
Chromosome . Primary Identifier  IV Chromosome Location . Start  5173332
Chromosome Location . End  5173627
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03F8.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47338 LAM-1, isoform a 197.9 1790 Caenorhabditis elegans
 

Other

20 RNAi

WormBase ID
WBRNAi00093779
WBRNAi00009247
WBRNAi00066992
WBRNAi00066994
WBRNAi00067175
WBRNAi00067310
WBRNAi00067339
WBRNAi00067412
WBRNAi00067516
WBRNAi00067695
WBRNAi00054702
WBRNAi00085351
WBRNAi00093782
WBRNAi00093784
WBRNAi00093785
WBRNAi00078047
WBRNAi00026470
WBRNAi00086100
WBRNAi00086099
WBRNAi00086101

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W03F8.5a 5173332 5173627 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002247 lam-1 W03F8.5 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:W03F8.5a 5173332 5173627 1
CDS:W03F8.5a 5174578 5175045 1
CDS:W03F8.5a 5175507 5175832 1
CDS:W03F8.5a 5176002 5176162 1
CDS:W03F8.5a 5176750 5177138 1
CDS:W03F8.5a 5177550 5178779 1
CDS:W03F8.5a 5178992 5179231 1
CDS:W03F8.5a 5179957 5181598 1
CDS:W03F8.5a 5181737 5182087 1
CDS:W03F8.5a 5182874 5183012 1
CDS:W03F8.5a 5183088 5183218 1

1 Sequence

Length
5373

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W03F8.5a.1 W03F8.5a.1 5901   IV: 5173332-5183746