WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03F8.3a.1 Sequence Name  W03F8.3a.1
Length (nt)  1273   Chromosome Location  IV: 5187155-5189095
Chromosome . Primary Identifier  IV Chromosome Location . Start  5187155
Chromosome Location . End  5189095 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03F8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020993 mtrf-1L W03F8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03F8.3a W03F8.3a 1170   IV: 5187155-5187329

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03F8.3a.1 5187155 5189095 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121548   175   IV: 5187155-5187329 Caenorhabditis elegans
Exon121549   356   IV: 5187384-5187739 Caenorhabditis elegans
Exon121550   345   IV: 5187789-5188133 Caenorhabditis elegans
Exon121551   397   IV: 5188699-5189095 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03F8.3a.1 5187155 5189095 1

1 Sequence

Length
1273

1 Sequence Ontology Term

Identifier Name Description
transcript