WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59E9AL.4.1 Sequence Name  Y59E9AL.4.1
Length (nt)  1729   Chromosome Location  IV: 5210903-5215192
Chromosome . Primary Identifier  IV Chromosome Location . Start  5210903
Chromosome Location . End  5215192 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59E9AL.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021994 Y59E9AL.4 Y59E9AL.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59E9AL.4 Y59E9AL.4 1668   IV: 5210955-5211190

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59E9AL.4.1 5210903 5215192 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121625   288   IV: 5210903-5211190 Caenorhabditis elegans
Exon121626   199   IV: 5211237-5211435 Caenorhabditis elegans
Exon121627   254   IV: 5211812-5212065 Caenorhabditis elegans
Exon121629   165   IV: 5212235-5212399 Caenorhabditis elegans
Exon121630   148   IV: 5212457-5212604 Caenorhabditis elegans
Exon121632   124   IV: 5212976-5213099 Caenorhabditis elegans
Exon121633   179   IV: 5213152-5213330 Caenorhabditis elegans
Exon121638   130   IV: 5213947-5214076 Caenorhabditis elegans
Exon121640   161   IV: 5214206-5214366 Caenorhabditis elegans
Exon121646   81   IV: 5215112-5215192 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59E9AL.4.1 5210903 5215192 -1

1 Sequence

Length
1729

1 Sequence Ontology Term

Identifier Name Description
transcript