WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H12.17.1 Sequence Name  F36H12.17.1
Length (nt)  1638   Chromosome Location  IV: 5267853-5277852
Chromosome . Primary Identifier  IV Chromosome Location . Start  5267853
Chromosome Location . End  5277852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H12.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018130 F36H12.17 F36H12.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H12.17 F36H12.17 1266   IV: 5268140-5268204

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H12.17.1 5267853 5277852 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121747   352   IV: 5267853-5268204 Caenorhabditis elegans
Exon121749   157   IV: 5268264-5268420 Caenorhabditis elegans
Exon121757   121   IV: 5270426-5270546 Caenorhabditis elegans
Exon121758   186   IV: 5270700-5270885 Caenorhabditis elegans
Exon121759   73   IV: 5270942-5271014 Caenorhabditis elegans
Exon121760   106   IV: 5271752-5271857 Caenorhabditis elegans
Exon121761   95   IV: 5272253-5272347 Caenorhabditis elegans
Exon121780   137   IV: 5276739-5276875 Caenorhabditis elegans
Exon121781   190   IV: 5276925-5277114 Caenorhabditis elegans
Exon121784   221   IV: 5277632-5277852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H12.17.1 5267853 5277852 -1

1 Sequence

Length
1638

1 Sequence Ontology Term

Identifier Name Description
transcript