WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41H10.3a.1 Sequence Name  F41H10.3a.1
Length (nt)  3796   Chromosome Location  IV: 5369801-5374777
Chromosome . Primary Identifier  IV Chromosome Location . Start  5369801
Chromosome Location . End  5374777 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41H10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018316 F41H10.3 F41H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41H10.3a F41H10.3a 3423   IV: 5369806-5369991

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41H10.3a.1 5369801 5374777 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon122156   191   IV: 5369801-5369991 Caenorhabditis elegans
Exon122159   54   IV: 5370051-5370104 Caenorhabditis elegans
Exon122162   81   IV: 5370151-5370231 Caenorhabditis elegans
Exon122165   150   IV: 5370281-5370430 Caenorhabditis elegans
Exon122168   303   IV: 5370484-5370786 Caenorhabditis elegans
Exon122171   139   IV: 5370836-5370974 Caenorhabditis elegans
Exon122174   566   IV: 5371397-5371962 Caenorhabditis elegans
Exon122179   544   IV: 5372024-5372567 Caenorhabditis elegans
Exon122186   477   IV: 5372686-5373162 Caenorhabditis elegans
Exon122189   279   IV: 5373213-5373491 Caenorhabditis elegans
Exon122195   481   IV: 5373667-5374147 Caenorhabditis elegans
Exon122204   531   IV: 5374247-5374777 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41H10.3a.1 5369801 5374777 1

1 Sequence

Length
3796

1 Sequence Ontology Term

Identifier Name Description
transcript