WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41H10.3b.1 Sequence Name  F41H10.3b.1
Length (nt)  3649   Chromosome Location  IV: 5369806-5374685
Chromosome . Primary Identifier  IV Chromosome Location . Start  5369806
Chromosome Location . End  5374685 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41H10.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018316 F41H10.3 F41H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41H10.3b F41H10.3b 3018   IV: 5369806-5369991

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41H10.3b.1 5369806 5374685 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon122157   186   IV: 5369806-5369991 Caenorhabditis elegans
Exon122160   54   IV: 5370051-5370104 Caenorhabditis elegans
Exon122163   81   IV: 5370151-5370231 Caenorhabditis elegans
Exon122166   150   IV: 5370281-5370430 Caenorhabditis elegans
Exon122169   303   IV: 5370484-5370786 Caenorhabditis elegans
Exon122172   139   IV: 5370836-5370974 Caenorhabditis elegans
Exon122175   566   IV: 5371397-5371962 Caenorhabditis elegans
Exon122180   544   IV: 5372024-5372567 Caenorhabditis elegans
Exon122187   477   IV: 5372686-5373162 Caenorhabditis elegans
Exon122190   279   IV: 5373213-5373491 Caenorhabditis elegans
Exon122194   194   IV: 5373667-5373860 Caenorhabditis elegans
Exon122199   237   IV: 5373911-5374147 Caenorhabditis elegans
Exon122201   439   IV: 5374247-5374685 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41H10.3b.1 5369806 5374685 1

1 Sequence

Length
3649

1 Sequence Ontology Term

Identifier Name Description
transcript