WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK616.6a Sequence Name  ZK616.6a
Length (nt)  525   Chromosome Location  IV: 5394026-5394214
Chromosome . Primary Identifier  IV Chromosome Location . Start  5394026
Chromosome Location . End  5394214
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK616.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26347 PERM-3, isoform a 19.3 174 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00093609
WBRNAi00093603
WBRNAi00085848
WBRNAi00059553
WBRNAi00093616
WBRNAi00038364
WBRNAi00059554
WBRNAi00116272
WBRNAi00116273

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK616.6a 5394026 5394214 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022776 perm-3 ZK616.6 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK616.6a 5394026 5394214 -1
CDS:ZK616.6a 5394332 5394550 -1
CDS:ZK616.6a 5394688 5394804 -1

1 Sequence

Length
525

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK616.6a.1 ZK616.6a.1 708   IV: 5393843-5394804