WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK616.3a.1 Sequence Name  ZK616.3a.1
Length (nt)  481   Chromosome Location  IV: 5397069-5397751
Chromosome . Primary Identifier  IV Chromosome Location . Start  5397069
Chromosome Location . End  5397751 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK616.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022773 ZK616.3 ZK616.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK616.3a ZK616.3a 405   IV: 5397070-5397211

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK616.3a.1 5397069 5397751 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon122278   143   IV: 5397069-5397211 Caenorhabditis elegans
Exon122279   73   IV: 5397261-5397333 Caenorhabditis elegans
Exon122280   119   IV: 5397435-5397553 Caenorhabditis elegans
Exon122283   146   IV: 5397606-5397751 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK616.3a.1 5397069 5397751 1

1 Sequence

Length
481

1 Sequence Ontology Term

Identifier Name Description
transcript