WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK616.9a Sequence Name  ZK616.9a
Length (nt)  957   Chromosome Location  IV: 5412891-5413055
Chromosome . Primary Identifier  IV Chromosome Location . Start  5412891
Chromosome Location . End  5413055
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK616.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26344 SPP-7, isoform a 36.2 318 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00000717
WBRNAi00059557
WBRNAi00038362

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK616.9a 5412891 5413055 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004992 spp-7 ZK616.9 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK616.9a 5412891 5413055 -1
CDS:ZK616.9a 5413102 5413176 -1
CDS:ZK616.9a 5413361 5413453 -1
CDS:ZK616.9a 5414121 5414366 -1
CDS:ZK616.9a 5414657 5414779 -1
CDS:ZK616.9a 5414844 5415000 -1
CDS:ZK616.9a 5415665 5415762 -1

1 Sequence

Length
957

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK616.9a.1 ZK616.9a.1 1054   IV: 5412828-5415796