WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:ZK616.10c.1 Sequence Name  ZK616.10c.1
Length (nt)  528   Chromosome Location  IV: 5416906-5418054
Chromosome . Primary Identifier  IV Chromosome Location . Start  5416906
Chromosome Location . End  5418054 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK616.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001223 ehn-3 ZK616.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK616.10c ZK616.10c 528   IV: 5416906-5417070

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK616.10c.1 5416906 5418054 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon122372   165   IV: 5416906-5417070 Caenorhabditis elegans
Exon122375   138   IV: 5417121-5417258 Caenorhabditis elegans
Exon122381   225   IV: 5417830-5418054 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK616.10c.1 5416906 5418054 -1

1 Sequence

Length
528

1 Sequence Ontology Term

Identifier Name Description
transcript