WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:Y4C6A.2c Sequence Name  Y4C6A.2c
Length (nt)  2938   Chromosome Location  IV: 5439075-5450644
Chromosome . Primary Identifier  IV Chromosome Location . Start  5439075
Chromosome Location . End  5450644 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y4C6A.2c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021152 mgl-3 Y4C6A.2 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y4C6A.2c 5439075 5450644 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon122440   317   IV: 5439075-5439391 Caenorhabditis elegans
Exon122450   187   IV: 5440994-5441180 Caenorhabditis elegans
Exon122455   117   IV: 5441730-5441846 Caenorhabditis elegans
Exon122460   161   IV: 5441895-5442055 Caenorhabditis elegans
Exon122467   141   IV: 5442374-5442514 Caenorhabditis elegans
Exon122480   250   IV: 5443713-5443962 Caenorhabditis elegans
Exon122485   169   IV: 5444074-5444242 Caenorhabditis elegans
Exon122496   295   IV: 5444626-5444920 Caenorhabditis elegans
Exon122506   78   IV: 5445482-5445559 Caenorhabditis elegans
Exon122513   106   IV: 5445607-5445712 Caenorhabditis elegans
Exon122520   117   IV: 5446125-5446241 Caenorhabditis elegans
Exon122531   123   IV: 5446287-5446409 Caenorhabditis elegans
Exon122543   321   IV: 5446713-5447033 Caenorhabditis elegans
Exon122554   75   IV: 5447154-5447228 Caenorhabditis elegans
Exon122558   83   IV: 5447983-5448065 Caenorhabditis elegans
Exon122581   117   IV: 5448367-5448483 Caenorhabditis elegans
Exon122598   281   IV: 5450364-5450644 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y4C6A.2c 5439075 5450644 1

1 Sequence

Length
2938

1 Sequence Ontology Term

Identifier Name Description
transcript